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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs8002853 chr13:28680036 A/C GTF3A chr13:27998681-28009960:+ 0.75 5.8 3.94E-7 Box Plot
ACC rs80047157 chr15:74637006 T/C CYP1A1 chr15:75011883-75017951:- 0.74 5.09 4.97E-6 Box Plot
ACC rs8011351 chr14:64399206 C/T SYNE2 chr14:64319701-64693151:+ 1.03 5.3 2.41E-6 Box Plot
ACC rs8019529 chr14:74293891 G/C LIN52 chr14:74551499-74667938:+ 0.49 5.34 2.11E-6 Box Plot
ACC rs8019946 chr14:74293630 T/C LIN52 chr14:74551499-74667938:+ 0.49 5.34 2.11E-6 Box Plot
ACC rs8023275 chr15:100789562 A/G LINS1 chr15:101099574-101143435:- 1.55 5.11 4.75E-6 Box Plot
ACC rs80274496 chr6:86408271 C/G SNHG5 chr6:86370668-86388454:- 0.68 6.09 1.38E-7 Box Plot
ACC rs8047655 chr16:24794064 G/A SLC5A11 chr16:24857162-24922949:+ 1.05 5.48 1.24E-6 Box Plot
ACC rs8049014 chr16:24698903 A/G SLC5A11 chr16:24857162-24922949:+ 0.92 5.31 2.34E-6 Box Plot
ACC rs8059133 chr16:50370703 G/C CYLD chr16:50775961-50835846:+ 0.59 5.45 1.39E-6 Box Plot
ACC rs8070085 chr17:41341984 C/T NBR2 chr17:41277627-41305688:+ 0.82 5.55 9.7E-7 Box Plot
ACC rs8079952 chr17:42812606 A/G CCDC43 chr17:42750437-42767147:- 1.27 5.35 2.03E-6 Box Plot
ACC rs8104808 chr19:52887427 A/C ZNF880 chr19:52873170-52889048:+ 0.81 7.16 2.79E-9 Box Plot
ACC rs8104812 chr19:52887437 A/C ZNF880 chr19:52873170-52889048:+ 0.81 7.16 2.79E-9 Box Plot
ACC rs8115730 chr20:20065341 C/T NAA20 chr20:19997760-20014299:+ 1.19 5.63 7.25E-7 Box Plot